Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4416429	4416504	76	88 [0]	[0] 208	yjfK	conserved hypothetical protein

TAAACTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCG  >  W3110S.gb/4416363‑4416428                                                                  | tAAACTGGCAGGAAAAACGCT‑GCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:475254/65‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTGACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:517877/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAGTATCGAACCCg  <  1:928474/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:341938/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:562734/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:513999/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:476588/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:468982/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:422124/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:419580/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:352361/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:342050/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:582809/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:340366/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:304984/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:281129/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:263227/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:100950/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:193165/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:192711/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1864279/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:709463/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:99203/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:970341/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:937884/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:896820/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:86574/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:858920/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:79316/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:74636/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:710341/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:570730/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:705284/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:693882/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:682491/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:657634/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:623164/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:623071/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:607318/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:601085/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:233990/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1348961/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1495073/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1429532/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:14208/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1858842/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1412920/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1411678/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1379753/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1376203/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1351732/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1420667/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1310595/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1308037/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:124515/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1234121/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1138158/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1104944/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1104551/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1027632/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1547833/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1810680/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1730578/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1706237/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1705554/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1705094/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1670188/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1649272/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1642636/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1516132/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1548111/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1600321/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1593313/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1556384/63‑1 (MQ=255)    aCTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1568111/63‑1 (MQ=255)     cTGTCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:854880/62‑1 (MQ=255)     cTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:276582/62‑1 (MQ=255)     cTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:119590/62‑1 (MQ=255)     cTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1589754/62‑1 (MQ=255)     cTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1359536/62‑1 (MQ=255)     cTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1361928/62‑1 (MQ=255)      tGGCAGGATAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:115134/61‑1 (MQ=255)        gCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:640856/59‑1 (MQ=255)                aaCGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:258129/51‑1 (MQ=255)                 aCGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:1703504/50‑1 (MQ=255)                  cGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:764312/49‑1 (MQ=255)                        cAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:78224/43‑1 (MQ=255)                                ttttAACAGCGAAGAACCGGGAAATATCGAACCCg  <  1:936479/35‑1 (MQ=255)                                                                  | TAAACTGGCAGGAAAAACGCTGGCAGCGATTTTTTAACAGCGAAGAACCGGGAAATATCGAACCCG  >  W3110S.gb/4416363‑4416428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑