Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	652934	652951	18	40 [0]	[0] 2	citA	sensory histidine kinase in two‑component regulatory system with citB

TTGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAGGGG  >  W3110S.gb/652869‑652933                                                                 | ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:7684/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:476024/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:505580/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:53709/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:542293/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:578120/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:580538/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:613532/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:677491/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:695880/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:45784/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:807441/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:815322/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:843428/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:886386/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:911540/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:919746/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:925295/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:973723/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:975981/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1528221/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1075648/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:109717/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1111756/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1194190/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1368516/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1376961/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1407173/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1436361/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1519082/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1011413/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1556169/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1558549/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:1845292/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:203361/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:209719/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:258252/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:362550/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:398127/1‑65 (MQ=255) ttGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAgggg  >  1:422240/1‑65 (MQ=255)                                                                 | TTGAAGTCGCCGATCAGGGCTGCGGCGTTCCAGAGTCTCTACGAGACAAAATATTTGAGCAGGGG  >  W3110S.gb/652869‑652933

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑