Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	963139	963146	8	77 [0]	[0] 34	rpsA	30S ribosomal subunit protein S1

ATCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAT  >  W3110S.gb/963074‑963138                                                                 | aTCACTGACATGGCCTGGAAAGGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:985604/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGTGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:294488/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGGGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1394168/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGCCGAAAt  >  1:297311/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:35501/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:528713/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:494987/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:478070/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:442340/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:43703/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:417834/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:417123/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:395750/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:363392/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:557076/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:337477/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:321490/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:317883/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:274061/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:270508/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:235289/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:80401/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:998610/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:96242/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:939151/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:867668/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:866495/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:859031/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:855971/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:823941/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:556652/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:765104/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:745937/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:703526/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:697219/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:669854/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:63698/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:565095/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1885064/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1216894/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1444341/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1437897/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1428568/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:135651/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1304795/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1301551/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1251682/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1248667/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1241568/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1470475/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:119500/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1163099/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1136652/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1119836/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1031458/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1031006/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1029247/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1018900/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:165963/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1007972/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1819896/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1782155/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1760315/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1759393/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1754598/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1729359/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:17256/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1696591/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:225970/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1583679/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1569926/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1564774/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1556344/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1553320/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1551893/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:154733/1‑65 (MQ=255) aTCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAt  >  1:1480240/1‑65 (MQ=255)                                                                 | ATCACTGACATGGCCTGGAAACGCGTTAAGCATCCGAGCGAAATCGTCAACGTGGGCGACGAAAT  >  W3110S.gb/963074‑963138

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑