Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1096993	1097043	51	35 [0]	[0] 115	ycdU	predicted inner membrane protein

TTCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAG  >  W3110S.gb/1096928‑1096992                                                                 | ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1245886/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:898783/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:85405/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:799782/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:793150/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:749396/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:666793/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:645694/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:638281/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:607019/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:598900/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:562197/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:529144/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:379949/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:342649/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:336340/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1723133/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1227366/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1289790/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1339356/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1439464/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1521001/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1564042/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1623343/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1630335/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1655050/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1662676/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1692612/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:188357/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCACCAg  <  1:664077/65‑1 (MQ=255) ttCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTATTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:510244/65‑1 (MQ=255)  tctcCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1590605/64‑1 (MQ=255)  tctcCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1399473/64‑1 (MQ=255)       aaGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:1267210/59‑1 (MQ=255)                             ggCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAg  <  1:950674/37‑1 (MQ=255)                                                                 | TTCTCCAAGCGGTACGCTTTTCTGGGCAGGCTTTTTTTGCAGGAAATCGATCTGTTTTTCTCCAG  >  W3110S.gb/1096928‑1096992

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑