Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1164045	1164075	31	61 [0]	[0] 27	ycfL	hypothetical protein

CGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGT  >  W3110S.gb/1163981‑1164044                                                                | cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:618017/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1032550/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:22047/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:244976/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:26864/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:326348/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:366907/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:368151/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:416594/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:431105/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:486076/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:495888/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:527918/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:573609/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:615569/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:20755/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:69073/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:722845/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:769693/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:838526/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:845186/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:862847/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:870853/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:907285/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:910471/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:914347/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:915083/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:916510/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:961092/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:99929/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1423617/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1054806/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1102745/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1155167/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:115689/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:120033/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1249426/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1293228/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1293514/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1355320/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1358854/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1405071/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1411830/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:201729/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1470926/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1789642/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1708608/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1694184/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1678564/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1678165/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1648295/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1567567/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1557546/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1530116/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1472590/64‑1 (MQ=255) cGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1432926/64‑1 (MQ=255) agTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:1624941/63‑1 (MQ=255)  gTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:437110/63‑1 (MQ=255)  gTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:974374/63‑1 (MQ=255)                       aTCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:112377/42‑1 (MQ=255)                          cTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGt  <  1:138252/39‑1 (MQ=255)                                                                | CGTCTGATATTCAACCTTCAGCATCCTCAACGCTTTATAACGAAAGGCAAGAACCCGTTACCGT  >  W3110S.gb/1163981‑1164044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑