Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1190513	1190634	122	84 [0]	[0] 5	phoQ	sensory histidine kinase in two‑compoent regulatory system with PhoP

ATCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCG  >  W3110S.gb/1190448‑1190512                                                                 | aTCACTGACGCTCATCTTTTCACTACGCTGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1700586/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:301694/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:656035/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:60516/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:544499/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:536826/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:511540/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:477011/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:459702/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:450032/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:444617/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:40056/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:679222/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:30134/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:262472/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:210207/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:205559/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:205098/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1847185/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1835450/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1020285/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:845392/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:988080/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:948407/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:943999/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:938322/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:917943/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:909082/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:888214/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:880311/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:872144/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:871574/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1825365/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:840624/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:823287/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:802270/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:770979/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:767915/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:743883/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:737116/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:708748/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:695935/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:129345/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1456275/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1743364/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1398074/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1378775/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1376193/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1340370/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1338814/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1324962/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:129729/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1454662/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1287362/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1278985/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1267460/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1261107/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1111683/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1079885/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1077962/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1077945/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1045860/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1655036/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1741549/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1718395/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1712930/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1703250/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1699921/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1697771/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1674838/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1483972/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1652047/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1632746/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:160096/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1597856/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1592743/65‑1 (MQ=255) aTCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1508805/65‑1 (MQ=255) aTCACTGACGCTCATCTATTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1537930/65‑1 (MQ=255)  tCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1597320/64‑1 (MQ=255)  tCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1123151/64‑1 (MQ=255)  tCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:552886/64‑1 (MQ=255)  tCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1070433/64‑1 (MQ=255)    agtGAGGCTCATCTTTTCACTACGCTGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:554787/60‑1 (MQ=255)                              gagaACGCAGCGTACTTTGCAGCACCGCCAGTGGCg  <  1:1052309/36‑1 (MQ=255)                                                                 | ATCACTGACGCTCATCTTTTCACTACGCAGAGAACGCAGCGTACTTTGCAGCACCGCCAGTGGCG  >  W3110S.gb/1190448‑1190512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑