Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1316023	1316198	176	74 [0]	[0] 2	ompW	outer membrane protein W

ATTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCG  >  W3110S.gb/1315958‑1316022                                                                 | aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAAGCg  <  1:1565/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:408139/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:539764/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:528617/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:477889/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:461955/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:452101/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:450411/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:411635/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:552794/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:401982/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:359117/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:336316/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:331701/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:321888/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:320894/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:314377/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:101458/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:721356/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:97453/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:9576/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:956440/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:926451/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:921862/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:911944/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:76629/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:763055/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:313818/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:721133/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:715669/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:713720/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:703350/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:68134/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:67775/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:627110/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:624584/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1265611/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:296577/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1471593/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1452798/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1436343/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:133647/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1324329/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1288810/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1284270/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1265832/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1477785/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1247513/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1243172/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1194125/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1193901/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1149094/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1119612/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1095256/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1067045/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1770026/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:296454/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:277438/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:260831/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:257223/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:256782/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1869649/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1866033/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1483964/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1766016/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1752061/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1600721/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1538577/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:153127/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1495578/65‑1 (MQ=255) aTTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:1487014/65‑1 (MQ=255)   tACTGGCAGGGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:956386/63‑1 (MQ=255)            cGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:46874/54‑1 (MQ=255)                      ccGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCg  <  1:38728/44‑1 (MQ=255)                                                                 | ATTACTGGCAGCGACGCCGTTCCGCCATAAAATCGGCACCCGGGCGACCGGCGATATTGCAACCG  >  W3110S.gb/1315958‑1316022

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑