Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	89427	89509	83	44 [0]	[0] 5	fruR/mraZ	DNA‑binding transcriptional dual regulator/conserved hypothetical protein

ATTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAC  >  W3110S.gb/89384‑89426                                           | atTTGCTTTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1158588/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:679890/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1874541/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1877401/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:360355/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:418764/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:449706/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:476758/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:480369/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:517310/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:543116/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:566113/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:573919/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1874319/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:723931/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:732960/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:760169/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:762879/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:763626/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:872415/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:921585/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:939773/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:976095/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1456124/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1115680/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1238059/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1249948/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1258156/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1310462/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1350465/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1379655/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1407717/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1449229/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1036004/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1456947/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1505400/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1585770/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1630032/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1668107/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:172466/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1791020/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1850346/1‑43 (MQ=255) atTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1854487/1‑43 (MQ=255) atTTGCTATGGAAAATAGTGAGTCATTTTAAAACGGTGATGAc  >  1:1156112/1‑43 (MQ=255)                                           | ATTTGCTGTGGAAAATAGTGAGTCATTTTAAAACGGTGATGAC  >  W3110S.gb/89384‑89426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑