Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1529056	1529109	54	5 [0]	[0] 3	yncH/rhsE	hypothetical protein/rhsE element core protein RshE

TGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATT  >  W3110S.gb/1528991‑1529055                                                                 | tttATTTTAAATGTTGATTCTTAATATAACCTAATCAATATATTATCAAGTGAGAGCTACACatt  <  1:1803274/63‑1 (MQ=255)  gTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACatt  <  1:1562014/64‑1 (MQ=255)    aTTTTAAATGTTGATTATTTATATAACCTAATAAATAGATTATCAAGTAAGAGCTACACatt  <  1:300818/62‑1 (MQ=255)        tAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACatt  <  1:1477281/58‑1 (MQ=255)                          ataACATAATAAATAGATTATCAAGTGAGAGCTACACatt  <  1:1244843/40‑1 (MQ=38)                                                                 | TGTATTTTAAATGTTGATTCTTAATATAACCTAATCAATAGATTATCAAGTGAGAGCTACACATT  >  W3110S.gb/1528991‑1529055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑