Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1654115	1654557	443	87 [0]	[0] 24	[intQ]–ynfP	[intQ],ynfP

GAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAG  >  W3110S.gb/1654051‑1654114                                                                | gagTATGGCTGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:727167/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:261968/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:447403/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:439103/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:41231/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:407926/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:378184/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:332714/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:307151/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:291195/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:278314/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:503405/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:25263/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:189025/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1844827/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1802181/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1775639/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1766317/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1759390/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1755164/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1746655/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1732416/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:7584/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:968255/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:940619/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:893046/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:880817/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:870843/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:867147/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:853698/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:822500/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:791003/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:786187/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:470637/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:670845/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:664589/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:663086/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:632804/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:609403/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:543655/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:531269/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:522730/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1713754/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1252013/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1399804/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1397477/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1383678/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1348764/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1342941/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1323830/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1315900/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1299951/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1289628/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1279711/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1408981/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1203847/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1171350/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1110730/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1100863/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1095910/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1090327/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1088437/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:106598/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1054711/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1029533/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1608723/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:170852/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1705432/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1696721/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:165788/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1657853/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:165699/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1636455/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1625706/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1616358/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1024154/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1602386/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1588023/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1585527/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1571868/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1548774/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1506285/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1447143/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:1445436/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:144261/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGagag  >  1:141433/1‑64 (MQ=255) gagTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTAAGCGagag  >  1:1751609/1‑64 (MQ=255)                                                                | GAGTATGGCAGAACAGAAAAACAAAAATGCACCTTTGTTTTTCAACCTGAAGTGTCAGCGAGAG  >  W3110S.gb/1654051‑1654114

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑