Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1691299	1691324	26	40 [0]	[0] 139	manA	mannose‑6‑phosphate isomerase

ATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCC  >  W3110S.gb/1691235‑1691298                                                                | aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:430697/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1101586/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1772404/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1826756/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:273931/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:319593/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:390662/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:402929/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:405593/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:421148/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1735551/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:481626/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:484926/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:589846/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:653902/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:823068/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:866044/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:887617/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:942929/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:990943/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1265353/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1112470/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1183431/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:119436/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1201210/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:120550/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1233237/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1241777/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1652584/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1266892/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1293186/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1471449/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1488672/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1569439/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1571260/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1574820/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:1605126/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:164836/1‑64 (MQ=255) aTTCCAGTGGATGATTTTGCCTTCTCGCTACATGACCTTAGTGATAAAGAAACCACCATTAGcc  >  1:958496/1‑64 (MQ=255) aTTCCAGTGGATGATTTTCCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCAGCATTAGcc  >  1:1238106/1‑64 (MQ=255)                                                                | ATTCCAGTGGATGATTTTGCCTTCTCGCTGCATGACCTTAGTGATAAAGAAACCACCATTAGCC  >  W3110S.gb/1691235‑1691298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑