Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1702368	1702647	280	78 [0]	[1] 145	malX	fused maltose and glucose‑specific PTS enzyme IIBC components

ACGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGTT  >  W3110S.gb/1702303‑1702367                                                                 | acGTCATCTTCCGTTTCGCTGTCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1676766/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:341652/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:486430/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:472748/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:468433/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:463634/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:42142/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:413973/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:385106/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:34657/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:346263/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:515048/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:257577/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:193934/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1872544/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1819559/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1819035/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1815846/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1808081/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1787563/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:773227/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:990113/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:986769/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:953973/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:94078/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:917829/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:880306/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:860724/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:817320/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:792621/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1699096/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:752326/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:728076/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:707970/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:702950/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:682933/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:68225/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:644674/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:584611/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:5751/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1176747/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1311188/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1307855/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1301579/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1299749/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1296677/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1291947/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1283805/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1237363/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1196049/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1317534/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1120303/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1119127/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1113410/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1086068/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1038333/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1031745/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:103148/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1015398/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1569020/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1682588/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1681634/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1676959/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1632694/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1626190/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1614335/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1602558/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1585878/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1575157/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1005467/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1567726/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:153592/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1501693/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1456277/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1456067/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1430974/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:142436/1‑65 (MQ=255) acGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGtt  >  1:1354328/1‑65 (MQ=255)                                                                 | ACGTCATCTTCCGTTTCGCTATCACCCGCTTCAATCTGAAAACCCCGGGGCGCGATAGCGAAGTT  >  W3110S.gb/1702303‑1702367

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑