Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1852226	1852361	136	83 [0]	[0] 165	sppA	protease IV

AGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACA  >  W3110S.gb/1852161‑1852225                                                                 | agagCTGGCAAAGGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:247866/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:239945/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:408393/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:403580/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:392449/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:349965/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:339727/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:328524/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:276921/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:249273/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:424002/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:233915/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:224122/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:195830/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1871995/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1792516/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1013430/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1775630/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1770456/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:666937/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:972589/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:958109/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:881222/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:842946/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:760341/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:731684/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:724765/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:724534/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:711271/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1792051/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:650447/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:638139/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:61115/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:583853/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:537525/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:519401/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:467080/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:463383/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1165584/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1352434/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1334758/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1313656/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1302529/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1300427/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1287197/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1274110/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1198037/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1169314/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1761513/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1158889/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1135876/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1130224/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1115603/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1090920/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1055469/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1043933/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1035765/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1387269/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1729440/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1683674/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1679816/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1605451/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1560505/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1542557/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1769272/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:150393/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1421674/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1374267/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1411978/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1409830/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1404362/65‑1 (MQ=255) agagCTGGCAAAAGTGAAACAGTGGCAGCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:12045/65‑1 (MQ=255)  gagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:947485/64‑1 (MQ=255)  gagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1560192/64‑1 (MQ=255)  gagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:299689/64‑1 (MQ=255)  gagCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:827500/64‑1 (MQ=255)        gCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1527940/58‑1 (MQ=255)              gTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1503492/52‑1 (MQ=255)                 aaaCAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:1016739/49‑1 (MQ=255)                 aaaCAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:667256/49‑1 (MQ=255)                   aCAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCTACa  <  1:691692/47‑1 (MQ=255)                   aCAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACa  <  1:289505/47‑1 (MQ=255)                     aGTGGCATCTGGAATATTACGATGATGAACCGACCTTCTTCGACa  <  1:968120/45‑1 (MQ=255)                                                                 | AGAGCTGGCAAAAGTGAAACAGTGGCATCTGGAATATTACGTTGATGAACCGACCTTCTTCGACA  >  W3110S.gb/1852161‑1852225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑