Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1908875	1908917	43	45 [0]	[0] 158	rrmA/cspC	23S rRNA m1G745 methyltransferase/stress protein, member of the CspA‑family

ACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGC  >  W3110S.gb/1908811‑1908874                                                                | aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:618605/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:401734/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:46550/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:497136/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:501115/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:552703/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:555840/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:573238/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:583120/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:588866/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:609375/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:395149/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:674539/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:71371/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:730162/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:750865/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:778239/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:80650/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:853943/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:886118/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:895725/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:954416/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1420436/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1026880/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1068866/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1143649/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1162676/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1196177/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1235047/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1311590/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1334942/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1361924/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1016106/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1474881/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1494362/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1524281/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1619148/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1755588/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:341733/64‑1 (MQ=255) aCGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:374691/64‑1 (MQ=255) aCGCGAATCACGAGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:410129/64‑1 (MQ=255)  cgcgAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAATGc  <  1:240054/63‑1 (MQ=255)  cgcgAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1476197/63‑1 (MQ=255)                     aaaTATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1403366/44‑1 (MQ=255)                        tatCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGc  <  1:1298298/41‑1 (MQ=255)                                                                | ACGCGAATCACGCGGCGGGCAAATATCCGAACGCCAGGAGCGAAGATAAAGCATAGTAAAAAGC  >  W3110S.gb/1908811‑1908874

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑