Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1973341	1973504	164	34 [0]	[0] 61	tar	methyl‑accepting chemotaxis protein II

GCGAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGA  >  W3110S.gb/1973276‑1973340                                                                 | gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTGGa  >  1:49601/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:673146/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:408406/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:549461/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:560270/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:56836/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:570117/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:595936/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:608904/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:317227/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:746352/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:770811/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:777188/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:833337/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:950061/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:956785/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:973770/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1708862/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1064852/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1099659/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1129211/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1137882/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1154705/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1450628/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1459986/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1472053/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1730702/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:1853896/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:195992/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:225379/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:258919/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGa  >  1:294329/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTAGa  >  1:281623/1‑65 (MQ=255) gcgAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAAATTTCTTCGa  >  1:1018226/1‑65 (MQ=255)                                                                 | GCGAGGATATTAGTCTGGAAGGCAATACCGTCGATAACGCTGATAATGTCGGCAATTTTCTTCGA  >  W3110S.gb/1973276‑1973340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑