Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2016671	2016958	288	53 [0]	[0] 63	fliF	flagellar basal‑body MS‑ring and collar protein

TTTCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAGC  >  W3110S.gb/2016606‑2016670                                                                 | tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:681085/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:281974/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:292024/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:386623/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:431531/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:519496/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:525264/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:558197/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:58023/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:597365/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:606432/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:620217/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:675706/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:276143/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:761351/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:772992/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:785049/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:808680/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:842138/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:866851/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:886567/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:887647/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:888403/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:892403/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:947307/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:948122/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1510702/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1044758/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1095425/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1120957/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1166654/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1232269/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1248847/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1333422/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1346105/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1354719/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1367382/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1384208/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1410139/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1477658/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1043392/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1516934/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1545289/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1584669/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:160267/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1689162/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1798979/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1846477/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:1853047/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:225578/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:248332/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAgc  >  1:273766/1‑65 (MQ=255) tttCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAAAAGCAGTGACGAAAgc  >  1:338809/1‑65 (MQ=255)                                                                 | TTTCTGAAAAACGCGGTGACTCGCTCAATGTCGTTAACTCGCCGTTCAATAGCAGTGACGAAAGC  >  W3110S.gb/2016606‑2016670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑