Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 2074381 2075176 796 112 [0] [0] 5 flu antigen 43 (Ag43) phase‑variable biofilm formation autotransporter

Only 100 of 112 total aligned reads displayed.

CAACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGTT  >  W3110S.gb/2074316‑2074380
                                                                |
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:420518/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:60648/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:598282/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:576035/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:566103/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:529812/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:520719/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:510125/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:484743/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:477373/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:452606/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:444748/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:427373/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:615541/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:412068/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:401244/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:217035/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:216756/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:208044/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:205212/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1847694/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1846547/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1829743/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1788462/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1004532/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:860932/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:981572/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:97500/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:95238/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:950177/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:946979/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:938324/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:927102/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:891877/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:865561/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:863353/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:862993/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1725839/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:852057/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:835278/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:817621/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:811478/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:794883/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:788398/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:739692/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:712392/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:691457/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:677015/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:668272/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1211149/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1705122/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1407990/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1376964/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:134992/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1338540/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:131220/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1308181/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1286990/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1253558/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1251762/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1231180/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1221065/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1409826/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1187524/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1168387/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1136691/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1121622/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1114528/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1102308/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1098893/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1079549/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1078705/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1062954/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1060790/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:152849/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1680714/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1657001/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1652957/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1621331/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1597451/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1593841/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1578280/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1577618/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1577039/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1566232/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1550853/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1422623/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:152378/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1523118/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1484569/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1473609/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1464442/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1434488/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1433923/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1432690/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1431217/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGtt  >  1:1428426/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGAGGtt  >  1:824145/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGCCAAATACCACTGTGGtt  >  1:1650514/1‑65 (MQ=255)
caACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGCCAAATACCACTGTGGtt  >  1:688110/1‑65 (MQ=255)
                                                                |
CAACCATCAATAAAAACGGTCGCCAGATTGTGAGAGCTGAAGGAACGGCAAATACCACTGTGGTT  >  W3110S.gb/2074316‑2074380

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑