Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2488866	2489082	217	51 [0]	[0] 211	emrK/evgA	EmrKY‑TolC multidrug resistance efflux pump, membrane fusion protein component/DNA‑binding response regulator in two‑component regulatory system with EvgS

CTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAT  >  W3110S.gb/2488801‑2488865                                                                 | ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:548529/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1816769/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:181801/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1835262/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1873632/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:249834/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:26837/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:287937/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:291110/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:307556/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:333554/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:384587/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:485637/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1773498/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:645547/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:65483/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:751177/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:781198/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:826420/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:860001/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:884457/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:907731/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:933797/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:973363/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:993427/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:131697/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1045086/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:104692/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1047948/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1084915/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1116016/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:113422/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:115248/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1188341/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1201004/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1312651/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1324881/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1336882/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1346668/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1410581/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:145546/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1460999/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1477634/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1619689/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1631299/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1694525/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1700439/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1735924/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATACCAAACACAGTGCAt  >  1:1038584/1‑65 (MQ=255) ctcATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCCTCATATCAAACACAGTGCAt  >  1:988119/1‑65 (MQ=255) ctcATAGATGAAATTTAAGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAt  >  1:1244727/1‑65 (MQ=255)                                                                 | CTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGCAT  >  W3110S.gb/2488801‑2488865

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑