Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2648158	2648233	76	22 [0]	[0] 58	yfhM	conserved hypothetical protein

GCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTG  >  W3110S.gb/2648234‑2648298 |                                                                 gCACACCACTATCACCGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:56266/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCAttttt      >  1:917679/1‑61 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:790477/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:448475/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:459138/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:45933/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:497631/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:499154/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:539830/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:605377/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:607395/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:624224/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:638093/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:647938/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:739663/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:761106/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:413756/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:821994/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:823927/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:832598/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:876208/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:879221/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:8962/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:90344/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:907402/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:941383/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:947579/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:966920/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:978310/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1504488/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1019811/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1024565/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1028649/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:106430/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1114960/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1126163/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1126892/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1252206/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1264503/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1267084/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1304991/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1325016/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1458252/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1458911/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1010688/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1515038/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1556962/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1639302/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1766860/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1824164/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1841936/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1842015/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1848650/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:1854690/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:243776/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:254853/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:334921/1‑65 (MQ=255) gCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTg  >  1:341341/1‑65 (MQ=255) |                                                                 GCACACCACTATCAACGGCAGACACCAGCACATTCACCTGTTTAGGCTTCTCGCCATTTTTAGTG  >  W3110S.gb/2648234‑2648298

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑