Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2679474	2679571	98	69 [0]	[0] 59	yphG	conserved hypothetical protein

ATTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCA  >  W3110S.gb/2679572‑2679636 |                                                                 aTTATGCAGGCAAAGCAGTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:611515/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCTGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:841657/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCACAAATCCa  <  1:1693868/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:186153/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1756332/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1862894/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1862969/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1875671/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:273568/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:291542/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:442250/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:508088/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:53101/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:568625/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:587030/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:587868/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:605388/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:627085/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:69932/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:730438/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:743175/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:751133/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:754640/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:779507/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:810708/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:834564/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:887228/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:889993/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:90380/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:908564/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:146817/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1087505/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1104310/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1126928/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1154472/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1202998/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1227065/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1252511/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1293907/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1345922/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:14222/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1422758/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1432767/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1452135/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1466057/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1836511/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1491569/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1560689/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1598989/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1603515/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1612105/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:163905/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1648836/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:165651/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1661780/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1662409/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1706937/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1745227/65‑1 (MQ=255) aTTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCa  <  1:1007766/65‑1 (MQ=255) |                                                                 ATTATGCAGGCAAAGCACTTCCTGATTGGTTGGGCAGGCGCGAAGACTTTGTTGGCAAAAATCCA  >  W3110S.gb/2679572‑2679636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑