Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2815219	2815492	274	7 [0]	[0] 69	yqaA	conserved inner membrane protein

GAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACT  >  W3110S.gb/2815493‑2815557 |                                                                 gAAGGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1811035/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAg                    >  1:1416976/1‑47 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGaaaa    >  1:357906/1‑63 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:223655/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:422894/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:342347/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:330807/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:2904/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:265165/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:234499/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:444758/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:222790/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1879690/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1824613/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1820562/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1806501/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1801806/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1780167/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:835164/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:965657/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:964685/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:962022/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:961685/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:947834/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:940684/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:929621/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:874438/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1777683/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:693546/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:680656/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:665112/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:594491/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:5408/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:528361/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:526806/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:118251/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1366655/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1339791/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1333720/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1329684/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1308018/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1287949/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1243456/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1187007/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1380234/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1169676/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1163690/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1139888/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1123397/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1118654/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:109988/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1054704/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1436187/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1763210/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1746930/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1737296/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1693398/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:158724/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1570323/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1568232/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1536075/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1504824/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1495394/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1457253/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1452114/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1440178/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAact  >  1:1033518/1‑65 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAac   >  1:1877365/1‑64 (MQ=255) gAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGAGt                         >  1:1548337/1‑42 (MQ=255) |                                                                 GAAAGCAACATTGCCACCAGCACGACTTCGGAGTTGCCGGGTAATAGTGTAGCGCTGAGAAAACT  >  W3110S.gb/2815493‑2815557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑