Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2851116	2851171	56	82 [0]	[0] 40	hypD	protein required for maturation of hydrogenases

TGCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGAAA  >  W3110S.gb/2851172‑2851236 |                                                                 tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCACAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1081846/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:436625/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1833931/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1843631/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1843813/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1871134/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:22055/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:2257/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:364191/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:386833/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:40614/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1831239/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:719727/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:749107/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:759103/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:771429/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:7984/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:819060/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:869582/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:876131/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1377649/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1026371/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1043959/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1053834/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1181199/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1223462/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1250864/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1330305/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1341311/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1357806/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1005832/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1497781/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1510008/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1535116/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1545438/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1551336/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1619676/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1643857/65‑1 (MQ=255) tgCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:1734647/65‑1 (MQ=255) tgCGGTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGaaa  <  1:305829/65‑1 (MQ=255) |                                                                 TGCGTTGAAACTGGCGCAGGAGAATCCAACCCGCAAAGTGGTGTTCTTCGGCTTAGGTTTTGAAA  >  W3110S.gb/2851172‑2851236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑