Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2881676	2881761	86	69 [0]	[0] 72	ygcL	hypothetical protein

ATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCA  >  W3110S.gb/2881762‑2881826 |                                                                 aTTCAAGAGGACTTTGCGGCTCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1478869/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCTCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:650306/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGGATTGATTCACAACCGCCGCCACGCGATTTcc   >  1:1143526/1‑64 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTcc   >  1:713248/1‑64 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTc    >  1:1584115/1‑63 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:4811/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:656284/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:65250/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:63874/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:597920/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:59001/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:672638/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:437726/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:364695/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:344252/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:292161/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:276530/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:220531/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:207906/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1864042/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:101842/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:705701/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:737692/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:74937/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:763657/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:791411/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:807616/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:825152/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:839561/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:858641/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:87466/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:92131/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:934601/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:949396/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:957198/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:975384/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1214855/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1465879/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1427600/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1388742/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1347194/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1346605/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1298134/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1283999/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1277476/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:183157/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1136920/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1123579/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1053699/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1046385/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1044875/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1041190/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:101464/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1553659/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1839746/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1779732/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1773177/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1760159/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1738216/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1708997/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1693887/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1692891/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1659319/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1625586/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:160804/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1599674/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1489724/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATCTCca  >  1:466738/1‑65 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAACATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTcc   >  1:276276/1‑64 (MQ=255) aTTCAAGAGGACTTTGCGGCGCAACATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:172450/1‑65 (MQ=255) aTTCAAGAGGACTTTGCAGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCca  >  1:1398819/1‑65 (MQ=255) aTTCAAGAGGACTTTGAGGCGCAATATTTCTGAATTGATTc                          >  1:992772/1‑41 (MQ=255) |                                                                 ATTCAAGAGGACTTTGCGGCGCAATATTTCTGAATTGATTCACAACCGCCGCCACGCGATTTCCA  >  W3110S.gb/2881762‑2881826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑