Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2888684	2888931	248	6 [0]	[0] 55	[cysI]–[cysJ]	[cysI],[cysJ]

GCGCCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATCG  >  W3110S.gb/2888932‑2888995 |                                                                gcgcCACAGCTCCGCGCCCTGTTCGCTCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1655647/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTGTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1354837/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:604491/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1826688/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1831436/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1853607/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:235624/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:280740/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:302847/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:312254/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:450849/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:485601/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:498802/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:506104/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:521865/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:563230/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1778609/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:634375/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:700317/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:742227/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:761635/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:765536/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:798127/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:798256/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:799503/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:810918/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:878307/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:902436/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:982313/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1361692/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1027833/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:103364/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1058525/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1062976/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1088020/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1113115/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1113621/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1128623/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1174476/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1257838/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1340583/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1343418/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1824235/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:139863/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1419741/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1438304/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1471168/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1524978/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1532187/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1563193/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1636287/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1642083/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1696068/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1723813/64‑1 (MQ=255) gcgcCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATcg  <  1:1008487/64‑1 (MQ=255) |                                                                GCGCCACAGCTCCGCGCCCTGTTCGCGCAGTTTGTCTTGTACGTAAACTTTTTCTTTTTGATCG  >  W3110S.gb/2888932‑2888995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑