Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2998182	2998295	114	83 [0]	[0] 43	ygeR	Tetratricopeptide repeat transcriptional regulator

CAGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGTT  >  W3110S.gb/2998296‑2998360 |                                                                 caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGTCAGtt  <  1:128802/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAgat  <  1:1156671/65‑3 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:551078/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1625855/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1641913/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1651179/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1671742/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1802207/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:323989/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:372516/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:540679/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:5439/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:548383/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1577962/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:557333/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:58276/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:678274/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:839089/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:892139/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:929700/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:946050/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:971537/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:99543/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1269131/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1025626/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:102995/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1057229/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1095744/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1123304/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1159986/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1161715/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:159602/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1278814/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1441390/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1476856/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1509685/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1535556/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1551523/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:155614/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1015123/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCACtt  <  1:1192856/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGGTCAGTCGCGCCAGtt  <  1:1466617/65‑1 (MQ=255) caGTTTTAGTTTCTGACCAACTTCAATGGGGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGtt  <  1:1172477/65‑1 (MQ=255) |                                                                 CAGTTTTAGTTTCTGACCAACTTCAATGGTGTAAGGGGGGGAAATGCCGTTCAGTCGCGCCAGTT  >  W3110S.gb/2998296‑2998360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑