Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3053793	3053794	2	22 [0]	[0] 73	ygfB	hypothetical protein

AGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAT  >  W3110S.gb/3053795‑3053859 |                                                                 aGCTCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1777131/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAg                                >  1:1585371/1‑35 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCcatcat  >  1:675614/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:984225/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:156323/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:1727687/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:1729702/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:1287724/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCa   >  1:1054619/1‑64 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:382593/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:391745/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:379006/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:426095/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:506088/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:358332/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:506245/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:583133/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:2744/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:583361/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1861377/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:61637/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:273346/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:756532/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:972661/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:919449/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:914117/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:853386/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:813912/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:772809/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:765681/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:761453/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:620045/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:746056/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:69873/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:695562/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:678821/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:662541/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:654933/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:653486/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:650780/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1259314/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1468086/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1433992/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1429852/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1408158/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1367352/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1342485/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1323007/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1320737/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1476049/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:123482/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1230477/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1223045/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1215881/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1049456/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1037061/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1034955/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:253592/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1480608/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1484638/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1562268/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1573431/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1611911/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1625671/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1657028/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1729783/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1734297/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:174311/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1806273/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1024415/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:187033/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:1876084/1‑65 (MQ=255) aGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAt  >  1:218115/1‑65 (MQ=255) |                                                                 AGCCCGATCGAAAACGCTGACATCATCGCCATCAGGCAGATAAAGCTGAAAAAGGAAGCCGTCAT  >  W3110S.gb/3053795‑3053859

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑