Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3147669	3147874	206	19 [0]	[0] 86	yqhA	conserved inner membrane protein

GCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGT  >  W3110S.gb/3147875‑3147938 |                                                                gCTGTGAGACGAAATTCTCATAACCGGAAAAcatc                               >  1:1864882/1‑35 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAAcatc                               >  1:1377160/1‑35 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCg             >  1:1370526/1‑53 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCACCCAGCGt  >  1:450486/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCg   >  1:982821/1‑63 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCg   >  1:816262/1‑63 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:519250/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:31731/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:503521/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:489317/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:466748/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:46441/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:451219/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:448993/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:422364/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:412755/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:412175/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:380825/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:372153/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:348104/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:345558/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:328625/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:328336/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:326895/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1026391/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:792178/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:959873/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:934421/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:932775/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:921940/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:887122/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:862361/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:839816/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:807091/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:793075/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:536779/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:768091/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:715774/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:661753/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:658613/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:64874/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:634799/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:622925/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:583155/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:571770/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1239543/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1525336/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1505398/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1486336/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1435845/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1367778/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1339756/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1334613/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:13253/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1317326/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1246000/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:156111/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1207230/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1171580/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1156240/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1127627/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1115798/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1099539/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:104571/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1029725/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1015498/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1574379/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:243461/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:24068/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1885350/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1878803/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1833926/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1777873/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1746964/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1715646/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1715498/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1702784/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1644963/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1643980/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1632876/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1622763/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1620632/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1586299/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:300541/1‑64 (MQ=255) gCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCAAACCAGCg   >  1:261529/1‑63 (MQ=255) gCTGTGAGACGAAATTCTCATAACAGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGt  >  1:1824284/1‑64 (MQ=255) |                                                                GCTGTGAGACGAAATTCTCATAACCGGAAAACATCACCATCACCAGCAAACCGCCAACCAGCGT  >  W3110S.gb/3147875‑3147938

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑