Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3460828	3460922	95	3 [0]	[0] 45	[thrT]	[thrT]

TCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTAA  >  W3110S.gb/3460923‑3460987 |                                                                 tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:526407/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1837689/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1861625/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1877559/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:193940/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:292165/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:353602/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:383620/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:434551/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:510267/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:520332/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:522928/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1814588/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:54253/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:713597/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:748060/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:754702/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:821142/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:827494/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:82874/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:845045/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:885025/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:897086/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1451035/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1110882/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:114496/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1153162/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1160111/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1228208/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:123965/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1245067/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1248636/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1268785/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1334052/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1087560/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1473110/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1484591/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1528794/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1587908/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1608363/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:16443/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1685164/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1699330/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1788123/65‑1 (MQ=255) tCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTaa  <  1:1797100/65‑1 (MQ=255) |                                                                 TCAGCACATCTTGGAGCGGGCAGCGGGAATCGAACCCGCATCATCAGCTTGGAAGGCTGAGGTAA  >  W3110S.gb/3460923‑3460987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑