Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3477009	3477052	44	111 [0]	[1] 52	sthA	pyridine nucleotide transhydrogenase, soluble

ATCGTCGGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGT  >  W3110S.gb/3477052‑3477117  |                                                                 aTCGTCGGCATGAACGTGGGCACGCTGAAAA‑TTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:49180/65‑1 (MQ=255)  tcgtctGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1277970/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGTGAAACAAAAGAGATTCTGGGt  <  1:1319686/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:536131/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:179414/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1820868/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1830469/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1834058/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1835234/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1836435/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:252041/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:257739/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:27082/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:300888/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:399772/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:517001/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1769553/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:559698/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:605286/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:635523/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:679519/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:80684/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:815468/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:84318/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:856220/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:899903/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:915286/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1490310/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1043616/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1048773/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1082015/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1116722/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1120492/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1130855/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1145349/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1195956/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1206533/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1285268/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1392879/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1441488/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1019673/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1510592/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1547456/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1559414/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1613137/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1637828/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1652660/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1671184/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:169510/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1736076/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGt  <  1:1746445/65‑1 (MQ=255)  tcgtcgGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGCGAAACAAAAGAGATTCTGGGt  <  1:298807/65‑1 (MQ=255)  |                                                                 ATCGTCGGCATGAACGTGGGCACGCTGAAAATTTTGTTCCATCGGGAAACAAAAGAGATTCTGGGT  >  W3110S.gb/3477052‑3477117

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑