Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3501227	3501267	41	58 [0]	[0] 37	katG	catalase/hydroperoxidase HPI(I)

CCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCT  >  W3110S.gb/3501268‑3501332 |                                                                 ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGc   >  1:626896/1‑64 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGc   >  1:1386231/1‑64 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1830682/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1695513/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1844858/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:197505/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:212759/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:371878/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:397777/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:457724/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:55978/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:608178/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:64763/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:648923/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:666067/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:773454/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:828475/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:87028/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:947681/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1388267/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1065795/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1070590/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1157011/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1249565/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1251773/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1295643/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1318984/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1319395/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1759766/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1392010/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1509952/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1513474/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1557013/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1574362/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1608737/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:1640699/1‑65 (MQ=255) ccGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCt  >  1:100820/1‑65 (MQ=255) |                                                                 CCGCCAGCGAGGCTTTACCAGACTCTTTCTGGATTTTCTCCAGAACAGGCAGAGCACGAACGGCT  >  W3110S.gb/3501268‑3501332

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑