Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3591938	3591960	23	78 [0]	[0] 98	yihF	conserved hypothetical protein

AGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTA  >  W3110S.gb/3591961‑3592024 |                                                                aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCTTa  <  1:243924/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:293123/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:475438/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:44531/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:437924/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:422431/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:403129/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:395176/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:39347/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:354886/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:351099/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:335603/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:33512/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:305025/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:4950/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:292784/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:245568/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:244126/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:232329/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:225639/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:215882/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:197441/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:195110/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1850856/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1833120/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:794181/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:980606/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:975819/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:956197/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:950642/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:924314/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:88823/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:884893/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:884866/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:839056/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:821970/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:812576/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1824339/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:757628/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:748709/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:721887/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:72135/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:686947/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:631203/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:620463/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:585237/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:579141/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:516467/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:498407/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1155624/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1391668/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1371322/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1349893/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1328512/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1297326/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1279045/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1260453/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1255160/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1242068/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1223824/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1210715/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1195998/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1464015/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1154120/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1116689/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1099165/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:107786/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1069720/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1066636/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1063100/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:106114/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1044635/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1038903/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1035052/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:167054/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1810930/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1807887/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1800096/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1794940/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1779193/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1775485/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1774839/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:174407/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1724902/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1706357/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1705042/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1023024/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1666176/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1637716/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1620962/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1582431/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1564641/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1551492/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1505177/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1503541/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1500770/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1499249/64‑1 (MQ=255) aGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTa  <  1:1483991/64‑1 (MQ=255) |                                                                AGTAAACTGGCCCTCACCAAAAGAAAACTTTCCATACTCTGCAGGGGCAACATCTAATGTCGTA  >  W3110S.gb/3591961‑3592024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑