Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3628131	3628165	35	35 [0]	[0] 64	rhtB	neutral amino‑acid efflux system

TGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCG  >  W3110S.gb/3628166‑3628230 |                                                                 tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTTGTGGGCGCGCTGTTAGCATCGGCg  >  1:1540897/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTggg                     >  1:463973/1‑46 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGATCGCTGTTAGc         >  1:1174407/1‑58 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCTCTg              >  1:1172286/1‑53 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGc   >  1:1654177/1‑64 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:278641/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:415847/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:362129/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:356001/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:33241/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:298898/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:560053/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:256298/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:248789/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1846026/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1845370/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1825931/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1784120/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:507456/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1015246/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:569855/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:569970/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:584862/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:58747/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:614677/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:616638/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:67966/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:705520/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:714662/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:793284/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:842082/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:963957/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:974643/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1739532/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1013129/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1015516/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1032103/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1061860/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1062547/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1071367/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1090017/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1115059/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1117356/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1136541/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:115167/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1173258/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1229894/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1243862/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1283777/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1305822/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1338784/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1425975/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1436062/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1463503/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1490900/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1509094/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1596088/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1599253/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1643619/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1703186/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:170354/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCg  >  1:1723998/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATAGGCg  >  1:549271/1‑65 (MQ=255) tGAAGGCGCTGAATAAGATTTTCGCCTCGTTGTTTATGc                            >  1:976774/1‑39 (MQ=255) |                                                                 TGAAGGCGCTGAATAAGATTTTCGGCTCGTTGTTTATGCTGGTGGGAGCGCTGTTAGCATCGGCG  >  W3110S.gb/3628166‑3628230

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑