Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3759291	3759402	112	39 [0]	[0] 42	recF	gap repair protein

CTCCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAGGGC  >  W3110S.gb/3759403‑3759468 |                                                                  ctcCCCGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGTTTGGCTTAACCAAAGa            >  1:410332/1‑56 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACTAACAgg    >  1:1431387/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:739205/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1158810/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:454644/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:577165/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:641933/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:660966/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:686770/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:702961/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:715094/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:291057/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:75578/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:771233/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:80270/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:829906/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:855760/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:859300/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:942908/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:978639/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1442811/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1165442/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1207735/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1211250/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1317856/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1354119/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1378270/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1384474/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:219565/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1462320/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1472544/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1478971/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1542623/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1578385/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1756964/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:178693/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1839132/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:1886836/1‑64 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAg     >  1:850757/1‑63 (MQ=255) ctcCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAg     >  1:1184304/1‑63 (MQ=255) ctcCACGGGCGATTAAAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAgg    >  1:855395/1‑64 (MQ=255) ctcCACGGGCGA‑TACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAGGGc  >  1:560919/1‑65 (MQ=255) |                                                                  CTCCACGGGCGATTACAGGGCGAAGAGCGCGAGACAGCGATTGGCTTAACCAAAGACAAACAGGGC  >  W3110S.gb/3759403‑3759468

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑