Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3900290	3900531	242	74 [0]	[0] 50	avtA	valine‑pyruvate aminotransferase

CACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCGG  >  W3110S.gb/3900532‑3900595 |                                                                cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGc                      >  1:1519020/1‑44 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATc          >  1:178755/1‑56 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:610053/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:391360/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:424848/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:487673/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:492088/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:507583/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:510724/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:526580/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:552607/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:581464/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:597109/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:327659/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:633669/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:650516/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:670380/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:702570/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:726753/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:765420/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:833422/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:835060/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:931834/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:932005/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:958642/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1536254/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1022378/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:104358/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:105981/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1071504/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:111288/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1152021/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1199656/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1247266/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1356063/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1382410/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1454191/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1505771/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1004316/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1674313/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:175087/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1822013/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1827093/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1831434/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1844271/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:1854398/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:229409/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCgg  >  1:280746/1‑64 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCg   >  1:590062/1‑63 (MQ=255) cACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCg   >  1:589496/1‑63 (MQ=255) |                                                                CACTTTCCAGCATGTCGGTCAGTAGCGTCTGGAAGTAGTCCTGCATTTCCGGGATCTGCGCCGG  >  W3110S.gb/3900532‑3900595

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑