Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3938251	3938679	429	3 [1]	[0] 85	[dppF]–[yhjV]	[dppF],[yhjV]

ACTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTG  >  W3110S.gb/3938680‑3938744 |                                                                 aCTTTATAGATCAGGAAAAACTGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1513862/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATGACGGGCTTCCCAACTg  <  1:53858/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:367826/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:493993/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:490200/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:47905/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:443971/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:412404/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:41127/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:401094/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:387169/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:51714/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:363338/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:310929/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:309249/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:292768/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:24657/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:231665/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:204720/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:202752/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:201853/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:182170/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:721393/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:997822/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:960813/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:927765/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:895932/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:891837/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:865542/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:823221/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:822749/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:800853/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:740589/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:498585/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:690456/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:664225/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:662638/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:647953/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:643344/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:613891/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:556766/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:530249/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1821489/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1204319/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1000589/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:134520/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1344840/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1340597/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:131894/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1306224/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1305852/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1291248/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1253288/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1226538/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1386140/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1159016/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1151549/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1093000/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1074278/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:10716/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1069685/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:105883/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1039666/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1005355/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1627856/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1817148/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1772321/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1760248/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1757562/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1734625/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1726803/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1684218/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:166531/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1628329/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1403688/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1566081/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1543365/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1529786/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:152376/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1511282/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1486789/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1475259/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1432261/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTg  <  1:1409020/65‑1 (MQ=255) aCTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTCCCCAACTg  <  1:936926/65‑1 (MQ=255) |                                                                 ACTTTATAGATCAGGAAAAACGGAATGAGGCACGACACAATACCATATAACGGGCTTCCCAACTG  >  W3110S.gb/3938680‑3938744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑