Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3966195	3966216	22	15 [0]	[0] 95	yhjD	conserved inner membrane protein

ATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCTTTTTT  >  W3110S.gb/3966217‑3966281 |                                                                 atcaCGATTTTAATCACTTCAAAACCAATAGCGGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1104924/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGaa                           >  1:1645020/1‑40 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTcc                    >  1:779713/1‑47 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAAt              >  1:857520/1‑53 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAAt              >  1:789548/1‑53 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCa            >  1:1780070/1‑55 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:303933/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:516412/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:484506/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:468007/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:454387/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:454247/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:410158/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:407867/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:406948/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:3787/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:586381/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:262658/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:239086/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:215847/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:207846/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:198744/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1886169/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1862033/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:185557/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1851032/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:810460/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:955588/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:95492/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:954850/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:94451/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:941612/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:937571/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:917979/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:895652/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:85153/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:834755/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:525423/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:799296/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:794262/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:685494/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:670742/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:650156/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:635956/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:59375/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1059943/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:578827/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1295649/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:150984/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1490090/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1479364/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1464563/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1436390/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1419700/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1407516/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1382710/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1368705/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1338090/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1298856/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1827941/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1285603/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1234418/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1221900/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1188411/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1162712/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1141463/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1135993/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1092448/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1073107/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1043167/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1543960/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1828097/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1815865/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1811208/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1805464/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1802806/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1787852/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1765937/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1756702/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1718284/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1703512/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1701458/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1701292/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1698546/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1684850/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1575521/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1573478/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1571681/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:1522918/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCttttt   >  1:407068/1‑64 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCttttt   >  1:1636765/1‑64 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCttttt   >  1:1880335/1‑64 (MQ=255) atcaCGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCcttttt  >  1:968043/1‑65 (MQ=255) atcaCGATTTTAATCACTTCAAAAACAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:671566/1‑65 (MQ=255) atcaCGATTTTAAACACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCtttttt  >  1:109692/1‑65 (MQ=255) |                                                                 ATCACGATTTTAATCACTTCAAAACCAATAGCAGCCAGAAATGTTCCGCGAATCAGGGCTTTTTT  >  W3110S.gb/3966217‑3966281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑