Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3969875	3969933	59	50 [0]	[0] 14	treF	cytoplasmic trehalase

CAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCC  >  W3110S.gb/3969934‑3969998 |                                                                 cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACgg                    >  1:778001/1‑47 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:1040929/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:1224875/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  <  1:1510796/65‑1 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:1720825/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:1792552/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:330606/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:437265/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  <  1:505314/65‑1 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:634827/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  <  1:898631/65‑1 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtcc  >  1:986662/1‑65 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgtc   >  1:144409/1‑64 (MQ=255) cAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGAtccgt    >  1:984316/1‑63 (MQ=255) |                                                                 CAAGCCAGGATTCGTCACGCGGCGTGTCGCGATCGTCCCAGTAACGGTTGAGCAGCGATCCGTCC  >  W3110S.gb/3969934‑3969998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑