Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3980935	3981038	104	97 [0]	[0] 93	mdtE	multidrug resistance efflux transporter

CAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGT  >  W3110S.gb/3981039‑3981103 |                                                                 cAACTCATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:991140/1‑65 (MQ=255) cAACACATTGACCGCACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:16813/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTcacgac                               >  1:707511/1‑36 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGaca                              >  1:1098161/1‑37 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGa                          >  1:298096/1‑41 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGCCCTCAGGCGTCATGGCGGCGGCGt  >  1:1183497/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGAcc                        >  1:580959/1‑43 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATggcggcggc    >  1:92031/1‑63 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATggcg         >  1:401656/1‑58 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGgcggcggcg   >  1:1070602/1‑64 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGgcggcggcg   >  1:1347713/1‑64 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:62824/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:255489/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:626317/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:573566/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:57288/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:571509/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:56256/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:560625/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:533636/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:479379/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:461006/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:447979/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:422349/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:326285/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:323404/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:32104/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:305946/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:967363/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:812477/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:946928/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:907820/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:890570/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:884507/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:875414/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:872097/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:853438/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:821583/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:819570/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:996411/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:767846/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:759263/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:757105/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:749531/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:995272/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:681112/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:666490/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:660765/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:659368/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1247474/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1600891/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1542529/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1490296/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1481982/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1477850/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1434202/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:143314/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:140956/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1377828/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:135692/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1605710/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1225564/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1197596/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1150641/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1143888/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1130399/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1105003/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1074196/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1065384/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:104660/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1032229/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1851504/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:281281/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:272935/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1009878/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:24772/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:230885/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:210730/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:194119/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:193496/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1885502/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1865695/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:29130/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1846268/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1842570/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1777028/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1774329/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1768680/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1762722/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1761994/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1757864/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1634933/1‑65 (MQ=255) cAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGt  >  1:1617529/1‑65 (MQ=255) |                                                                 CAACACATTGACCGAACCGGGGGAGAGTGTGACGACACCGACCTCAGGCGTCATGGCGGCGGCGT  >  W3110S.gb/3981039‑3981103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑