Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4041422	4041425	4	54 [1]	[0] 73	livJ	leucine/isoleucine/valine transporter subunit

GCGGTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCA  >  W3110S.gb/4041426‑4041489 |                                                                gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:334765/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:557796/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:534774/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:465434/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:439386/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:436584/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:391731/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:346127/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:342165/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:582226/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:32804/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:239933/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1851616/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1839593/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1832953/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1818597/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1817001/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1788557/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:872952/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:993716/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:97432/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:966541/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:95027/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:931745/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:930522/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:915590/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:897967/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1747845/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:828525/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:728667/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:726876/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:725859/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:710905/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:700520/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:657476/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:654989/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1186419/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1377847/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1355957/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1326008/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1323146/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1299603/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1240386/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1204221/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1202833/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1731388/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1175538/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:114471/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1119502/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1056305/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1042783/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1028826/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1025857/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1549072/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1020137/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1724672/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1700173/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1696110/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1682148/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1679734/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1634249/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1574907/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1409628/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1545525/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1515756/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1500327/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1459185/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1443202/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1439784/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCAGCAGGGCTGAAAACTCa  <  1:1394977/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGGCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1503333/64‑1 (MQ=255) gcggTTATCACCCGGAAATGGGGCAAATCCTGCGGCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:985456/64‑1 (MQ=255) gcggGTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCa  <  1:1308985/64‑1 (MQ=255) |                                                                GCGGTTATCACCCGGAAATGGGGCAAATCCTGCGTCAGGCACGCGCGGCAGGGCTGAAAACTCA  >  W3110S.gb/4041426‑4041489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑