Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4080783	4080888	106	74 [0]	[0] 11	rtcR	sigma 54‑dependent transcriptional regulator of rtcBA expression

CGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGCC  >  W3110S.gb/4080889‑4080936 |                                                cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:1151677/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:1300316/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:1455824/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:1530303/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:1799691/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:314333/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:535172/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:550063/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:588560/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:729529/48‑1 (MQ=255) cgcgTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGcc  <  1:925624/48‑1 (MQ=255) |                                                CGCGTGACGCTGGCAGAAAGTTCGCGAAAGTTACCGCGCCATGTTGCC  >  W3110S.gb/4080889‑4080936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑