Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4415317	4415341	25	97 [0]	[0] 89	yjfJ	predicted transcriptional regulator effector protein

TGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAA  >  W3110S.gb/4415342‑4415405 |                                                                tGACGCTAAAGCTGCACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGgcg           >  1:1751524/1‑55 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCTGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1533632/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAAtctc                            >  1:1781111/1‑38 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTcg                           >  1:1545413/1‑39 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTgg             >  1:767145/1‑53 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:314864/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:419747/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:418528/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:394907/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:377324/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:348033/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1786808/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1859374/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:316643/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:250291/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:297452/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:450514/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:290682/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:279961/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:273851/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:219603/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:257672/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:71306/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:966128/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:948720/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:929406/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:906182/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:863043/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:855269/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:820500/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:812443/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:807254/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:799741/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:424071/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:663203/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:633033/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:568582/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:568495/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:547070/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:525688/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:519439/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:495938/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1009847/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1265553/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:137853/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1342995/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1775569/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1332172/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1287621/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1284874/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1279172/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1275656/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1266417/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1335030/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1242228/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1216808/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1175236/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1137959/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1088736/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1057225/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1027351/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1022324/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1004553/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:143580/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1767289/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1765042/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1760742/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:175297/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1723378/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1683930/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:166794/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1665144/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1621565/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1555818/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1531337/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1472684/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:1396286/1‑64 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:646415/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:376430/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:1287667/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:1519417/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:1484664/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:235023/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:888875/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:917888/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:1878222/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaa   >  1:180946/1‑63 (MQ=255) tGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGa    >  1:1325414/1‑62 (MQ=255) tGACGCTAAAGCTGAACCCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGaaa  >  1:701630/1‑64 (MQ=255) |                                                                TGACGCTAAAGCTGAACTCGATAAAGCCGGAAAATCTCGCGTTGATCTGCTGGCGCGGGTGAAA  >  W3110S.gb/4415342‑4415405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑