Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	560066	560137	72	30 [0]	[0] 54	sfmD	predicted outer membrane export usher protein

AATTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTGG  >  W3110S.gb/560138‑560201 |                                                                aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:585685/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1045156/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1798939/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1835220/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1872628/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:199731/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:244345/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:278016/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:356387/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:364551/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:397871/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:439298/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:468610/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:534395/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1776139/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:601311/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:611980/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:615169/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:698301/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:718831/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:750787/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:772953/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:778535/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:842388/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:849976/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:923450/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:956556/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1544339/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1074134/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1077612/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:115572/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1199735/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1246970/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1264661/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1304393/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1339268/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1348503/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1461904/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1517570/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:152919/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1535843/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1767145/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1546831/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1588964/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1639421/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1647957/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1658545/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1670207/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1695127/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1712149/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1732100/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1760859/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGACGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:47367/64‑1 (MQ=255) aaTTACACCGCCTTTTTATTAGGGCTGGGACGCAATCTCGGGAACTGGGGCGCAGTGTCGCTgg  <  1:1627128/64‑1 (MQ=255) |                                                                AATTACACCGCCTTTTTATTAGGGCTGGGGCGCAATCTCGGGAACTGGGGCGCAGTGTCGCTGG  >  W3110S.gb/560138‑560201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑