Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	666977	667169	193	15 [0]	[0] 61	mrdA	transpeptidase involved in peptidoglycan synthesis

GTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGATCATCA  >  W3110S.gb/667170‑667234 |                                                                 gTCTTCGGCGGTGCTCATCAGCAAATGAGGACCCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1434074/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAgg         >  1:644550/1‑58 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:248084/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:492692/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:467732/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:461837/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:43176/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:276841/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:252386/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:510758/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:245109/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:230983/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:186647/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1844261/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1839929/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:181755/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1809945/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1782531/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:575292/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:594393/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:755743/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:791855/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:819172/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:869741/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:88500/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:919135/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:922740/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:950380/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:962568/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:963426/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:994866/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1426640/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1036135/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1112250/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1139601/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:115870/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:12072/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1236934/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1269344/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1275874/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1287258/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1323649/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:134088/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:134873/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1367721/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1384880/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1796517/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1439467/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1469042/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1501214/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1540514/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:161072/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1622277/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1650608/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1667557/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1690943/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1730480/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1736141/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1750988/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:1767696/1‑65 (MQ=255) gTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGAtcatca  >  1:10009/1‑65 (MQ=255) |                                                                 GTCTTCGGCGGTGCTCATCAGCAAATGAGGAACCTTCACGATACCGTCATTAATCAGGATCATCA  >  W3110S.gb/667170‑667234

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑