Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	59412	59503	92	26 [0]	[0] 85	yabQ/rluA	hypothetical protein/pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)

ACGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATG  >  W3110S.gb/59504‑59567 |                                                                aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGa                        >  1:1261416/1‑42 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGa                        >  1:1869348/1‑42 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAgg                   >  1:1199682/1‑47 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGa             >  1:1026032/1‑53 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAAt   >  1:632081/1‑63 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAAt   >  1:1723032/1‑63 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:217819/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:469901/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:453467/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:386079/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:352009/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1785729/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:304487/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:254562/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:239360/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1795347/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1869890/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:981885/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1858541/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1851890/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1843204/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1831963/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1826765/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1812025/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:761309/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:970267/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:963316/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:954273/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:952431/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:937318/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:901560/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:895638/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:882168/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:828203/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:506572/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:74065/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:713985/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:708980/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:669014/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:641326/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:578855/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:56261/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:536820/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:519316/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1195920/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:135223/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1290998/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1270420/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1262174/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1259523/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1248274/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:12396/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1227862/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1209466/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1198017/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1365069/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1182560/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1159653/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1157436/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1153708/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1145599/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1131888/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1129979/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1122864/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:11081/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:158150/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1769130/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1721921/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1720785/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1707837/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1673644/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:165666/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1641035/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1623893/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:158687/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:177905/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1547883/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1530322/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1520329/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1515710/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1509017/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1481180/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1466056/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:141314/1‑64 (MQ=255) aCGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATg  >  1:1380263/1‑64 (MQ=255) |                                                                ACGGTCAACGGGTGAAGAAAAAGTTCAAAAATTCGCTGTGGAGCAGGAAGGGAATTACCGAATG  >  W3110S.gb/59504‑59567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑