Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1103454	1103856	403	2 [0]	[0] 96	csgD/csgB	DNA‑binding transcriptional activator in two‑component regulatory system/curlin nucleator protein, minor subunit in curli complex

AAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAG  >  W3110S.gb/1103857‑1103921 |                                                                 aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGTCGGGCaagaag  <  1:29151/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGCCGGGCaagaag  <  1:1581073/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaat  <  1:1622136/65‑2 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:449840/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:455022/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:44261/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:411940/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:404929/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:388283/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:351186/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:344326/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:34131/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:319084/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:318910/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:301697/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:300777/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:300369/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:287212/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:267984/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:242283/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:201536/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:199335/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:191222/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:186829/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1868055/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:688766/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:983977/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:972383/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:96579/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:946420/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:912509/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:865305/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:789469/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:770127/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:740333/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:740330/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:703645/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1793148/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:681956/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:674984/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:654552/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:642112/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:639455/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:575865/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:503078/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:485226/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:476757/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:471316/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:457706/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1213392/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1350254/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1350083/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1345638/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1313277/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1305523/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1303713/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1289447/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1277/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1274416/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1260292/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:123266/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1380927/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1178453/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1174056/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1163398/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1138897/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1107372/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1060007/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1053473/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1049111/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1039229/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1009245/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1385115/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:170633/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1686248/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1668450/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1663584/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1653164/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1651453/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1646564/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:161690/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:158055/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1579096/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1564459/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1539029/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1510307/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1494962/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1466037/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:145221/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1443264/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1425957/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1416156/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:141376/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1004101/65‑1 (MQ=255) aaaaGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGAGCaagaag  <  1:775640/65‑1 (MQ=255) aaaaGACGAGGTTTCTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCaagaag  <  1:1732685/65‑1 (MQ=255) |                                                                 AAAAGACGAGGTTTGTCACGGCTTGTGCGCAAGACATATCGCAGCAATCAGCGACGGGCAAGAAG  >  W3110S.gb/1103857‑1103921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑