Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1231075	1231161	87	3 [0]	[0] 13	hlyE	hemolysin E

CATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATGG  >  W3110S.gb/1231162‑1231226 |                                                                 cATTAAATCATCATAATCACCGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:40490/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1093885/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1514588/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1526665/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1544668/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1592413/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:1884589/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:315359/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:400379/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:706182/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:983375/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATgg  <  1:987391/65‑1 (MQ=255) cATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCAATgg  <  1:1190713/65‑1 (MQ=255) |                                                                 CATTAAATCATCATAATCAACGTAGAATCTGGTTGTTTCAGTTTCCGTTTTTATCTCACCGATGG  >  W3110S.gb/1231162‑1231226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑