Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1247906	1248518	613	121 [0]	[0] 19	treA	periplasmic trehalase

AGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAACG  >  W3110S.gb/1248519‑1248572 |                                                      aGGTTCCGGCAGCGGTAACAGATAATCCCATTTTTCGGTGTTTTCGGTTGAAcg  <  1:1126658/54‑1 (MQ=39) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGTTGTTTTCGGTAGAAcg  <  1:318565/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1499221/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:802181/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:72870/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:647084/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:369702/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1824993/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1759642/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1689195/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1576333/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1004615/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1444567/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:141646/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1301652/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1300767/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1248072/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1210793/54‑1 (MQ=255) aGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAAcg  <  1:1110886/54‑1 (MQ=255) |                                                      AGGTTCCGGCAGCGGTAACAGAGAATCCCATTTTTCGGTGTTTTCGGTAGAACG  >  W3110S.gb/1248519‑1248572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑