Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1253620	1253625	6	50 [0]	[0] 27	dhaR	predicted DNA‑binding transcriptional regulator, dihydroxyacetone

ACAGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTTC  >  W3110S.gb/1253626‑1253690 |                                                                 acaGGACGCTCCGCAACCCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1008343/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTa        >  1:618989/1‑59 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAg       >  1:736444/1‑60 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCttac  >  1:209414/1‑63 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1863550/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:900744/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:880301/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:854922/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:675349/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:659239/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:630294/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:609108/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:433186/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:379037/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:312561/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1518664/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1447293/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1443433/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1428334/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1417304/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1312643/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1156419/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1090648/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1085740/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1083322/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1081665/1‑65 (MQ=255) acaGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTtc  >  1:1019842/1‑65 (MQ=255) |                                                                 ACAGGACGATCCGCAAACCCGCCGCTTGATTCATTTTGGTCGCCAGGCGGCGCGCAGTAGCTTTC  >  W3110S.gb/1253626‑1253690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑