Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ W3110S.gb 1291200 1291454 255 101 [0] [0] 135 rssA conserved hypothetical protein

Only 100 of 135 total aligned reads displayed.

CGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACAG  >  W3110S.gb/1291455‑1291518
|                                                               
cgTCTGATAGAAAGGTTAGGCAGCATAACGACACGTCTGGCGGTGACAGCGCCAACGGCAACag  <  1:1845054/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGAGACGTCGGGCGGTGACAGCGCCATCGGCAACag  <  1:731703/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:371759/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:590425/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:584392/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:520151/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:488361/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:485509/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:443177/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:433606/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:420867/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:402701/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:386602/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:38009/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:631716/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:370578/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:363763/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:354486/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:345609/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:342627/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:317612/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:311017/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:289914/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:278450/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:271170/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:265737/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:824970/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:987299/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:985810/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:985512/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:976869/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:954807/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:931160/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:897569/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:887140/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:853704/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:844230/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:838498/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:22483/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:819630/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:807753/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:758210/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:757008/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:744915/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:713313/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:693889/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:689677/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:65879/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:653533/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:646296/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1237638/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1017247/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1468688/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1440807/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1412883/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1408926/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1396610/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1388463/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1375169/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1274770/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1274535/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1273006/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1259645/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1478471/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1224232/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1223068/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1208659/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1150868/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1135499/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1134269/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1081221/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1068759/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1066958/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:105884/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1021799/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1509471/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:194487/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:186276/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1860977/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1827731/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1809322/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1806359/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1745060/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1743941/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1736850/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1708367/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1704543/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1701314/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1672894/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1644336/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:163727/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1576932/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1559035/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1524654/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1515857/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:1495478/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAAAag  <  1:1642/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGGGACAGCGCCAACGGCAACag  <  1:1235717/64‑1 (MQ=255)
cgTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGGGACAGCGCCAACGGCAACag  <  1:246614/64‑1 (MQ=255)
cgTATGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACag  <  1:171667/64‑1 (MQ=255)
|                                                               
CGTCTGAAAGAAAGGTTAGGCAGCATAACGACACGTCGGGCGGTGACAGCGCCAACGGCAACAG  >  W3110S.gb/1291455‑1291518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑