Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1391767	1392085	319	3 [0]	[0] 45	mpaA	murein peptide amidase A

ACCACATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGA  >  W3110S.gb/1392086‑1392150 |                                                                 accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACGGGAGAGCGTGACGACCGa  <  1:886203/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACTGa  <  1:157199/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:789104/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:413292/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:426449/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:572035/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:605143/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:631320/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:667713/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:675300/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:686856/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:693786/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:696082/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:73908/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:338377/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:823415/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:864912/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:867074/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:895778/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:938729/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:942141/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:95542/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:971407/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1589707/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1400903/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1407812/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1410769/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1433002/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1434001/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1439296/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1440755/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1463152/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:151381/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1586097/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:409282/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1602334/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1607350/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1614449/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1624475/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1644917/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1690917/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:169679/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1855541/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:305437/65‑1 (MQ=255) accacATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGa  <  1:1074561/65‑1 (MQ=255) |                                                                 ACCACATGATGACGGCGCAAAGAAGGTGTCAACGTCCGCAGAGCACAGGAGAGCGTGACGACCGA  >  W3110S.gb/1392086‑1392150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑